Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | CE139_RS10240 | Not Available | Negative | 2245290 - 2246786 | 53241.4 |
| mannitol dehydrogenase family protein | CE139_RS10245 | Not Available | Negative | 2246859 - 2248334 | 54801.3 |
| abc transporter atp-binding protein | CE139_RS10250 | Not Available | Negative | 2248401 - 2249498 | 40182.9 |
| carbohydrate abc transporter permease | CE139_RS10255 | Not Available | Negative | 2249518 - 2250351 | 30937.7 |
| carbohydrate abc transporter permease | CE139_RS10260 | Not Available | Negative | 2250362 - 2251294 | 33924.5 |
| abc transporter substrate-binding protein | CE139_RS10265 | Not Available | Negative | 2251417 - 2252742 | 48254.2 |
| hypothetical protein | CE139_RS10270 | Not Available | Negative | 2252958 - 2253272 | 11484.7 |
| hypothetical protein | CE139_RS10275 | Not Available | Negative | 2253416 - 2253661 | 8967.79 |
| hypothetical protein | CE139_RS10280 | Not Available | Negative | 2253814 - 2254254 | 16244.7 |
| inositol monophosphatase family protein | CE139_RS10285 | Not Available | Positive | 2254556 - 2255365 | 28931.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





