Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme inhibitor lpri family protein | CE139_RS10040 | Not Available | Negative | 2199738 - 2200115 | 13711.6 |
| lysr substrate-binding domain-containing protein | CE139_RS10045 | Not Available | Negative | 2200170 - 2201126 | 34658.5 |
| dmt family transporter | CE139_RS10050 | Not Available | Positive | 2201231 - 2202133 | 31715.0 |
| dmt family transporter | CE139_RS10055 | Not Available | Positive | 2202156 - 2203052 | 31260.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CE139_RS10060 | Not Available | Negative | 2203069 - 2205291 | 79561.7 |
| fad binding domain-containing protein | CE139_RS10065 | Not Available | Negative | 2205302 - 2206282 | 35060.2 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | CE139_RS10070 | Not Available | Negative | 2206279 - 2206947 | 23565.4 |
| (2fe-2s)-binding protein | CE139_RS10075 | Not Available | Positive | 2207265 - 2207795 | 18802.4 |
| fad binding domain-containing protein | CE139_RS10080 | Not Available | Positive | 2207792 - 2208778 | 35248.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CE139_RS10085 | Not Available | Positive | 2208775 - 2211000 | 80117.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





