Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS25275 | Not Available | Negative | 2178841 - 2179002 | 5684.83 |
| hypothetical protein | CE139_RS09950 | Not Available | Positive | 2179001 - 2179156 | 5647.71 |
| methyl-accepting chemotaxis protein | CE139_RS09955 | Not Available | Negative | 2179272 - 2181185 | 68333.2 |
| acetolactate synthase large subunit | CE139_RS09960 | Not Available | Negative | 2181710 - 2183356 | 60348.8 |
| ybfb/yjij family mfs transporter | CE139_RS09965 | Not Available | Negative | 2183509 - 2184657 | 39411.3 |
| putrescine utilization regulator ptrr | CE139_RS09970 | Not Available | Positive | 2184767 - 2185651 | 32450.1 |
| gfo/idh/moca family protein | CE139_RS09975 | Not Available | Positive | 2185702 - 2186622 | 33138.3 |
| trna (uridine(54)-c5)-methyltransferase trma | CE139_RS09980 | Not Available | Negative | 2187455 - 2188543 | 40848.7 |
| ncs2 family permease | CE139_RS09985 | Not Available | Negative | 2188604 - 2189899 | 44773.4 |
| mfs transporter | CE139_RS09990 | Not Available | Negative | 2190022 - 2191413 | 49722.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





