Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS25675 | Not Available | Negative | 2169953 - 2170816 | 29973.0 |
| duf2857 domain-containing protein | CE139_RS25680 | Not Available | Negative | 2170811 - 2171584 | 28133.3 |
| plp-dependent aminotransferase family protein | CE139_RS09905 | Not Available | Negative | 2171935 - 2173335 | 50230.7 |
| gnat family n-acetyltransferase | CE139_RS09910 | Not Available | Positive | 2173422 - 2173871 | 16730.4 |
| fmn-dependent nadh-azoreductase | CE139_RS09915 | Not Available | Positive | 2173868 - 2174506 | 23020.9 |
| carboxymuconolactone decarboxylase family protein | CE139_RS09920 | Not Available | Positive | 2174510 - 2174941 | 15556.8 |
| yajd family hnh nuclease | CE139_RS09925 | Not Available | Positive | 2175095 - 2175451 | 13616.8 |
| atp-dependent clp protease proteolytic subunit | CE139_RS09930 | Not Available | Positive | 2175643 - 2176257 | 22141.1 |
| sulp family inorganic anion transporter | CE139_RS09935 | Not Available | Positive | 2176518 - 2178002 | 52665.1 |
| universal stress protein | CE139_RS09940 | Not Available | Positive | 2178015 - 2178866 | 30483.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





