Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization repressor | CE139_RS09850 | Not Available | Positive | 2158713 - 2159426 | 26862.1 |
| fmn-dependent nadh-azoreductase | CE139_RS09855 | Not Available | Negative | 2159785 - 2160393 | 22355.7 |
| pepsy-associated tm helix domain-containing protein | CE139_RS09860 | Not Available | Negative | 2161151 - 2162524 | 49066.3 |
| hypothetical protein | CE139_RS09865 | Not Available | Negative | 2162614 - 2163021 | 14418.8 |
| gnat family n-acetyltransferase | CE139_RS09870 | Not Available | Positive | 2163124 - 2163669 | 20341.3 |
| precorrin-6a synthase (deacetylating) | CE139_RS09875 | Not Available | Negative | 2163636 - 2164397 | 28430.1 |
| excinuclease abc subunit uvra | CE139_RS09880 | Not Available | Negative | 2164472 - 2167087 | 93577.5 |
| hnh endonuclease | CE139_RS09885 | Not Available | Negative | 2167137 - 2167775 | 23811.6 |
| sbal_3080 family lipoprotein | CE139_RS09890 | Not Available | Negative | 2167849 - 2168418 | 20686.6 |
| duf2252 domain-containing protein | CE139_RS09895 | Not Available | Negative | 2168630 - 2169823 | 44277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





