Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CE139_RS09750 | Not Available | Negative | 2136634 - 2137917 | 46966.3 |
| sugar kinase | CE139_RS09755 | Not Available | Negative | 2137961 - 2138890 | 33106.2 |
| sugar phosphate isomerase/epimerase family protein | CE139_RS09760 | Not Available | Negative | 2138883 - 2139665 | 27597.0 |
| substrate-binding domain-containing protein | CE139_RS09765 | Not Available | Negative | 2139723 - 2140760 | 36966.2 |
| cina family protein | CE139_RS09770 | Not Available | Positive | 2140926 - 2141426 | 17316.6 |
| recombinase reca | CE139_RS09775 | Not Available | Positive | 2141513 - 2142556 | 37106.8 |
| recombination regulator recx | CE139_RS09780 | Not Available | Positive | 2142622 - 2143074 | 17333.7 |
| tigr00730 family rossman fold protein | CE139_RS09785 | Not Available | Negative | 2143302 - 2144381 | 40244.2 |
| quorum-sensing-regulated virulence factor family protein | CE139_RS09790 | Not Available | Negative | 2144397 - 2144804 | 15033.1 |
| pp_01958 | CE139_RS09795 | Not Available | Positive | 2144947 - 2145681 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





