Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | CE139_RS09700 | Not Available | Positive | 2125305 - 2126363 | 38257.3 |
| 5'/3'-nucleotidase sure | CE139_RS09705 | Not Available | Positive | 2126351 - 2127106 | 26464.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CE139_RS09710 | Not Available | Positive | 2127145 - 2127783 | 23764.8 |
| peptidoglycan dd-metalloendopeptidase family protein | CE139_RS09715 | Not Available | Positive | 2127954 - 2128790 | 29056.7 |
| rna polymerase sigma factor rpos | CE139_RS09720 | Not Available | Positive | 2128901 - 2129893 | 37593.1 |
| ferredoxin fdxa | CE139_RS09725 | Not Available | Negative | 2130301 - 2130624 | 11932.0 |
| dna mismatch repair protein muts | CE139_RS09730 | Not Available | Negative | 2130693 - 2133269 | 94526.7 |
| pas domain-containing sensor histidine kinase | CE139_RS09735 | Not Available | Negative | 2133362 - 2135311 | 70420.7 |
| hypothetical protein | CE139_RS09740 | Not Available | Negative | 2135376 - 2135582 | 7545.66 |
| nad(p)-dependent oxidoreductase | CE139_RS09745 | Not Available | Negative | 2135636 - 2136619 | 35228.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





