Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | CE139_RS09650 | Not Available | Positive | 2115256 - 2116572 | 48214.2 |
| ctp synthase | CE139_RS09655 | Not Available | Positive | 2116715 - 2118343 | 59843.7 |
| 3-deoxy-8-phosphooctulonate synthase | CE139_RS09660 | Not Available | Positive | 2118346 - 2119194 | 30733.4 |
| phosphopyruvate hydratase | CE139_RS09665 | Not Available | Positive | 2119274 - 2120563 | 45175.4 |
| septum formation initiator family protein | CE139_RS09670 | Not Available | Positive | 2120730 - 2121008 | 10748.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CE139_RS09675 | Not Available | Positive | 2121008 - 2121709 | 25362.4 |
| lysr substrate-binding domain-containing protein | CE139_RS09680 | Not Available | Negative | 2121758 - 2122660 | 33944.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | CE139_RS09685 | Not Available | Positive | 2122762 - 2123874 | 39049.1 |
| s-formylglutathione hydrolase | CE139_RS09690 | Not Available | Positive | 2123914 - 2124768 | 31644.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CE139_RS09695 | Not Available | Positive | 2124835 - 2125308 | 16692.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





