Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e protease regulator rsep | CE139_RS09600 | Not Available | Positive | 2102108 - 2103460 | 48651.4 |
| outer membrane protein assembly factor bama | CE139_RS09605 | Not Available | Positive | 2103534 - 2105903 | 87351.4 |
| omph family outer membrane protein | CE139_RS09610 | Not Available | Positive | 2105942 - 2106445 | 18922.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | CE139_RS09615 | Not Available | Positive | 2106445 - 2107518 | 37360.7 |
| 3-hydroxyacyl-acp dehydratase fabz | CE139_RS09620 | Not Available | Positive | 2107564 - 2108004 | 16712.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | CE139_RS09625 | Not Available | Positive | 2108001 - 2108777 | 28365.0 |
| lipid-a-disaccharide synthase | CE139_RS09630 | Not Available | Positive | 2108794 - 2109921 | 40994.5 |
| ribonuclease hii | CE139_RS09635 | Not Available | Positive | 2109921 - 2110556 | 22682.7 |
| dna polymerase iii subunit alpha | CE139_RS09640 | Not Available | Positive | 2110633 - 2114154 | 130698.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CE139_RS09645 | Not Available | Positive | 2114295 - 2115245 | 35156.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





