Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate transaminase | CE139_RS09550 | Not Available | Negative | 2091055 - 2092248 | 43141.9 |
| [protein-pii] uridylyltransferase | CE139_RS09555 | Not Available | Negative | 2092273 - 2094972 | 101937.0 |
| type i methionyl aminopeptidase | CE139_RS09560 | Not Available | Negative | 2094983 - 2095765 | 29010.9 |
| 30s ribosomal protein s2 | CE139_RS09565 | Not Available | Positive | 2096052 - 2096789 | 27078.7 |
| translation elongation factor ts | CE139_RS09570 | Not Available | Positive | 2096921 - 2097790 | 30539.7 |
| ump kinase | CE139_RS09575 | Not Available | Positive | 2097983 - 2098726 | 26554.5 |
| ribosome recycling factor | CE139_RS09580 | Not Available | Positive | 2098723 - 2099280 | 20518.6 |
| polyprenyl diphosphate synthase | CE139_RS09585 | Not Available | Positive | 2099299 - 2100048 | 27815.6 |
| phosphatidate cytidylyltransferase | CE139_RS09590 | Not Available | Positive | 2100048 - 2100863 | 29118.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CE139_RS09595 | Not Available | Positive | 2100860 - 2102041 | 41903.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





