Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Luxr family transcriptional regulator | CE139_RS13155 | Not Available | Negative | 2838989 - 2839327 | 12440.7 |
| hypothetical protein | CE139_RS13160 | Not Available | Negative | 2839375 - 2839596 | 8399.05 |
| Hypothetical protein | CE139_RS13165 | Not Available | Negative | 2839593 - 2839817 | 8083.84 |
| hypothetical protein | CE139_RS13170 | Not Available | Negative | 2839879 - 2840160 | 10340.6 |
| Hypothetical protein | CE139_RS13175 | Not Available | Negative | 2840576 - 2840845 | 10028.7 |
| Hypothetical protein | CE139_RS13180 | Not Available | Positive | 2841169 - 2841642 | 15811.0 |
| hypothetical protein | CE139_RS13185 | Not Available | Negative | 2841690 - 2842034 | 13512.2 |
| hypothetical protein | CE139_RS13190 | Not Available | Negative | 2842184 - 2842405 | 8062.69 |
| hypothetical protein | CE139_RS13195 | Not Available | Negative | 2842582 - 2842752 | 6661.93 |
| Putative phage dna-binding protein | CE139_RS13200 | Not Available | Negative | 2842856 - 2843956 | 41437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





