Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter atp-binding protein | CE139_RS09450 | Not Available | Negative | 2072676 - 2073404 | 26574.4 |
| lipopolysaccharide transport periplasmic protein lpta | CE139_RS09455 | Not Available | Negative | 2073401 - 2073943 | 19702.5 |
| lps export abc transporter periplasmic protein lptc | CE139_RS09460 | Not Available | Negative | 2073930 - 2074502 | 21284.5 |
| kpsf/gutq family sugar-phosphate isomerase | CE139_RS09465 | Not Available | Negative | 2074585 - 2075559 | 33774.1 |
| atp-binding cassette domain-containing protein | CE139_RS09470 | Not Available | Positive | 2075764 - 2076573 | 29565.4 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | CE139_RS09475 | Not Available | Positive | 2076573 - 2077367 | 28039.1 |
| outer membrane lipid asymmetry maintenance protein mlad | CE139_RS09480 | Not Available | Positive | 2077367 - 2077843 | 17063.7 |
| phospholipid-binding protein mlac | CE139_RS09485 | Not Available | Positive | 2077858 - 2078508 | 23862.4 |
| lipid asymmetry maintenance protein mlab | CE139_RS09490 | Not Available | Positive | 2078505 - 2078819 | 10680.8 |
| bola family protein | CE139_RS09495 | Not Available | Positive | 2078893 - 2079132 | 8920.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





