Pseudomonas oryzihabitans strain MS8

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas oryzihabitans strain MS8 is a Gram-negative, rod-shaped bacterium that thrives in damp and humid environments, including farm settings, fresh water, soil, and on surfaces of respiratory devices and mechanical ventilators. This species exhibits aerobic characteristics and is motile due to the presence of flagella, which allows it to navigate through its diverse habitats. This strain has been documented to inhabit various hosts, including Homo sapiens (humans), Oryza sativa (rice), Capsicum annuum (bell pepper), Cucumis melo (melon), and Capsicum chinense (habanero pepper). Within humans, Pseudomonas oryzihabitans strain MS8 is associated with a range of health effects, including bacteremia, pneumonia, peritonitis, meningitis, and septicemia, among others. Its pathogenicity in plants, particularly rice, indicates a potential role in agricultural contexts. The presence of this bacterium in both clinical settings and agricultural environments underscores its ecological versatility and its dual impact on human health and plant life. As it can exist in mechanical ventilators and respiratory equipment, the strain poses risks for patients with compromised health, especially those reliant on such devices. Understanding the habitats and effects of Pseudomonas oryzihabitans strain MS8 can inform infection control practices and agricultural management strategies to mitigate its pathogenic potential in both humans and plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas oryzihabitans
Strainstrain MS8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas oryzihabitans strain MS8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdamp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Capsicum annuum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman; Plant

Genome Summary

Pseudomonas oryzihabitans strain MS8 chromosome.

Gene Summary

Adenine Count

937969 bp

Thymine Count

937205 bp

Guanine Count

1780010 bp

Cytosine Count

1778132 bp

Genome Length

5436061 bp

Protein-coding Genes

4960 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbon-nitrogen hydrolase family proteinCE139_RS09400Not AvailablePositive2063726 - 206456529871.7
metalloprotease tlddCE139_RS09405Not AvailablePositive2064677 - 206612250405.8
ribosome biogenesis factor yjgaCE139_RS09410Not AvailableNegative2066158 - 206668220069.9
metalloprotease pmbaCE139_RS09415Not AvailablePositive2066775 - 206812447480.1
superoxide dismutaseCE139_RS09420Not AvailablePositive2068349 - 206896322702.6
hpr family phosphocarrier proteinCE139_RS09425Not AvailableNegative2069031 - 20693039587.65
rnase adapter rapzCE139_RS09430Not AvailableNegative2069335 - 207018932523.9
pts iia-like nitrogen regulatory protein ptsnCE139_RS09435Not AvailableNegative2070191 - 207065516693.2
ribosome hibernation-promoting factor, hpf/yfia familyCE139_RS09440Not AvailableNegative2070674 - 207098211524.9
rna polymerase factor sigma-54CE139_RS09445Not AvailableNegative2071074 - 207257356167.5

Displaying genes 1971 – 1980 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepticaemiaCausesPMC10277831
Prosthetic valve endocarditisCausesPMC10277831
PeritonitisCausesPMC10277831
Periorbital cellulitisCausesPMC10865052
SepsisCausesPMC5423562
BacteremiaCausesPMC5423562
PeritonitisCausesPMC5423562
EndophthalmitisCausesPMC5423562
Biliary tract infectionsCausesPMC5423562
MeningitisCausesPMC5423562

Displaying health effects 1 – 10 of 15 in total