Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | CE139_RS09400 | Not Available | Positive | 2063726 - 2064565 | 29871.7 |
| metalloprotease tldd | CE139_RS09405 | Not Available | Positive | 2064677 - 2066122 | 50405.8 |
| ribosome biogenesis factor yjga | CE139_RS09410 | Not Available | Negative | 2066158 - 2066682 | 20069.9 |
| metalloprotease pmba | CE139_RS09415 | Not Available | Positive | 2066775 - 2068124 | 47480.1 |
| superoxide dismutase | CE139_RS09420 | Not Available | Positive | 2068349 - 2068963 | 22702.6 |
| hpr family phosphocarrier protein | CE139_RS09425 | Not Available | Negative | 2069031 - 2069303 | 9587.65 |
| rnase adapter rapz | CE139_RS09430 | Not Available | Negative | 2069335 - 2070189 | 32523.9 |
| pts iia-like nitrogen regulatory protein ptsn | CE139_RS09435 | Not Available | Negative | 2070191 - 2070655 | 16693.2 |
| ribosome hibernation-promoting factor, hpf/yfia family | CE139_RS09440 | Not Available | Negative | 2070674 - 2070982 | 11524.9 |
| rna polymerase factor sigma-54 | CE139_RS09445 | Not Available | Negative | 2071074 - 2072573 | 56167.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





