Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CE139_RS09300 | Not Available | Negative | 2037851 - 2039443 | 58882.9 |
| abc transporter substrate-binding protein | CE139_RS09305 | Not Available | Negative | 2039486 - 2041084 | 59223.2 |
| abc transporter substrate-binding protein | CE139_RS09310 | Not Available | Negative | 2041155 - 2042753 | 59771.1 |
| simpl domain-containing protein | CE139_RS09315 | Not Available | Negative | 2043000 - 2043707 | 25084.9 |
| atp-binding protein | CE139_RS09320 | Not Available | Positive | 2043885 - 2045144 | 45669.7 |
| response regulator transcription factor | CE139_RS09325 | Not Available | Positive | 2045161 - 2045721 | 20757.9 |
| abc transporter atp-binding protein/permease | CE139_RS09330 | Not Available | Positive | 2045846 - 2047579 | 65156.5 |
| fadr/gntr family transcriptional regulator | CE139_RS09335 | Not Available | Positive | 2047663 - 2048415 | 27782.3 |
| 5-dehydro-4-deoxyglucarate dehydratase | CE139_RS09340 | Not Available | Positive | 2048549 - 2049460 | 32799.3 |
| alginate lyase family protein | CE139_RS09345 | Not Available | Positive | 2049717 - 2050736 | 36491.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





