Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine-specific translation elongation factor | CE139_RS09195 | Not Available | Positive | 2012040 - 2013953 | 69204.4 |
| hypothetical protein | CE139_RS09205 | Not Available | Negative | 2014069 - 2015079 | 35549.6 |
| tetr/acrr family transcriptional regulator | CE139_RS09210 | Not Available | Positive | 2015224 - 2015832 | 21675.2 |
| bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha | CE139_RS09215 | Not Available | Negative | 2015842 - 2019873 | 145627.0 |
| nitrite reductase large subunit nirb | CE139_RS09220 | Not Available | Positive | 2020456 - 2023005 | 91795.8 |
| nitrite reductase small subunit nird | CE139_RS09225 | Not Available | Positive | 2023008 - 2023364 | 12827.3 |
| hypothetical protein | CE139_RS09230 | Not Available | Positive | 2023741 - 2023950 | 7540.29 |
| eal domain-containing protein | CE139_RS09235 | Not Available | Negative | 2023955 - 2026489 | 91546.4 |
| duf4136 domain-containing protein | CE139_RS09240 | Not Available | Negative | 2026650 - 2027234 | 21946.0 |
| duf4136 domain-containing protein | CE139_RS09245 | Not Available | Negative | 2027297 - 2027908 | 22043.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





