Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase | CE139_RS00535 | Not Available | Positive | 121528 - 123027 | 56015.5 |
| polyphosphate kinase 1 | CE139_RS00540 | Not Available | Negative | 124036 - 126264 | 83011.5 |
| porphobilinogen synthase | CE139_RS00545 | Not Available | Negative | 126274 - 127296 | 37178.5 |
| deda family protein | CE139_RS00550 | Not Available | Positive | 127560 - 128114 | 20857.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS00555 | Not Available | Positive | 128232 - 130352 | 76333.7 |
| yaii/yqxd family protein | CE139_RS00560 | Not Available | Negative | 130367 - 130828 | 16705.4 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS00565 | Not Available | Positive | 130930 - 131694 | 27600.4 |
| homoserine/homoserine lactone efflux protein | CE139_RS00570 | Not Available | Negative | 131704 - 132339 | 22602.4 |
| mechanosensitive ion channel family protein | CE139_RS00575 | Not Available | Negative | 132344 - 132922 | 21400.4 |
| atp-binding cassette domain-containing protein | CE139_RS00580 | Not Available | Negative | 132922 - 134829 | 70321.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





