Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | CE139_RS08945 | Not Available | Positive | 1954093 - 1955229 | 39526.1 |
| mfs transporter | CE139_RS08950 | Not Available | Positive | 1955390 - 1956733 | 47899.3 |
| d-lactate dehydrogenase | CE139_RS08955 | Not Available | Positive | 1956814 - 1958583 | 64791.3 |
| lysr family transcriptional regulator | CE139_RS08960 | Not Available | Negative | 1958602 - 1959540 | 34228.7 |
| beta-glucosidase bglx | CE139_RS08965 | Not Available | Negative | 1960372 - 1962651 | 82305.5 |
| glucarate dehydratase family protein | CE139_RS08970 | Not Available | Negative | 1962799 - 1964076 | 46487.6 |
| vrr-nuc domain-containing protein | CE139_RS08975 | Not Available | Positive | 1964258 - 1965919 | 62927.8 |
| atp-dependent dna helicase | CE139_RS08980 | Not Available | Positive | 1965916 - 1968189 | 83619.9 |
| glyoxalase superfamily protein | CE139_RS08985 | Not Available | Negative | 1968507 - 1968890 | 14378.3 |
| glucan biosynthesis protein d | CE139_RS08990 | Not Available | Positive | 1969123 - 1970757 | 61389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





