Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CE139_RS08900 | Not Available | Negative | 1941985 - 1943430 | 51386.1 |
| l-talarate/galactarate dehydratase | CE139_RS08905 | Not Available | Negative | 1943503 - 1944654 | 42537.9 |
| mfs transporter | CE139_RS08910 | Not Available | Negative | 1944677 - 1946035 | 48925.6 |
| laci family dna-binding transcriptional regulator | CE139_RS08915 | Not Available | Negative | 1946123 - 1947157 | 36652.4 |
| lyse family translocator | CE139_RS08920 | Not Available | Positive | 1947302 - 1947907 | 20717.1 |
| arac family transcriptional regulator | CE139_RS08925 | Not Available | Positive | 1947926 - 1948756 | 30842.6 |
| bcct family transporter | CE139_RS08930 | Not Available | Positive | 1948904 - 1950877 | 71681.0 |
| methyl-accepting chemotaxis protein | CE139_RS25665 | Not Available | Negative | 1950929 - 1951636 | 24535.7 |
| duf2857 domain-containing protein | CE139_RS25670 | Not Available | Negative | 1951790 - 1952929 | 41137.7 |
| carbon-nitrogen hydrolase family protein | CE139_RS08940 | Not Available | Negative | 1953128 - 1953877 | 25393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





