Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii plp-dependent enzyme | CE139_RS08850 | Not Available | Positive | 1928843 - 1930006 | 43682.2 |
| tonb-dependent receptor | CE139_RS08855 | Not Available | Positive | 1930188 - 1932404 | 80449.2 |
| fe2+-dependent dioxygenase | CE139_RS08860 | Not Available | Positive | 1932466 - 1933149 | 24716.4 |
| sulfite reductase flavoprotein subunit alpha | CE139_RS08865 | Not Available | Positive | 1933134 - 1935638 | 90687.7 |
| dmt family transporter | CE139_RS08870 | Not Available | Negative | 1935647 - 1936096 | 15842.1 |
| mbl fold metallo-hydrolase | CE139_RS08875 | Not Available | Negative | 1936290 - 1937153 | 31981.9 |
| cell division protein zape | CE139_RS08880 | Not Available | Negative | 1937245 - 1938345 | 40755.0 |
| pyridoxal phosphate-dependent aminotransferase | CE139_RS08885 | Not Available | Positive | 1938506 - 1939726 | 44053.9 |
| hypothetical protein | CE139_RS08890 | Not Available | Negative | 1939727 - 1940509 | 26326.5 |
| sigma-54-dependent transcriptional regulator | CE139_RS08895 | Not Available | Negative | 1940663 - 1942000 | 47601.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





