Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-forming cellulose synthase catalytic subunit | CE139_RS08650 | Not Available | Negative | 1882817 - 1885015 | 80932.6 |
| cellulose synthase operon protein yhjq/bcsq | CE139_RS08655 | Not Available | Negative | 1885018 - 1886091 | 37613.9 |
| cellulose biosynthesis protein bcsc | CE139_RS08660 | Not Available | Negative | 1886458 - 1889475 | 109077.0 |
| glutamate-5-semialdehyde dehydrogenase | CE139_RS08665 | Not Available | Positive | 1889727 - 1890992 | 45184.2 |
| nicotinate-nucleotide adenylyltransferase | CE139_RS08670 | Not Available | Positive | 1890992 - 1891654 | 24481.5 |
| ribosome silencing factor | CE139_RS08675 | Not Available | Positive | 1891665 - 1892015 | 12699.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CE139_RS08680 | Not Available | Positive | 1892021 - 1892488 | 17719.7 |
| penicillin-binding protein 2 | CE139_RS08685 | Not Available | Positive | 1892501 - 1894408 | 71057.0 |
| rod shape-determining protein roda | CE139_RS08690 | Not Available | Positive | 1894453 - 1895556 | 40006.7 |
| lytic murein transglycosylase b | CE139_RS08695 | Not Available | Positive | 1895596 - 1896600 | 36985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





