Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS08550 | Not Available | Negative | 1858895 - 1859440 | 19994.2 |
| hypothetical protein | CE139_RS08555 | Not Available | Negative | 1859561 - 1859698 | 5033.67 |
| mate family efflux transporter | CE139_RS08560 | Not Available | Negative | 1859763 - 1861115 | 47688.0 |
| pyroglutamyl-peptidase i | CE139_RS08565 | Not Available | Negative | 1861195 - 1861833 | 22276.9 |
| duf979 domain-containing protein | CE139_RS08570 | Not Available | Negative | 1861842 - 1862792 | 33134.8 |
| duf969 domain-containing protein | CE139_RS08575 | Not Available | Negative | 1862789 - 1863496 | 25692.3 |
| lysr family transcriptional regulator | CE139_RS08580 | Not Available | Positive | 1863769 - 1864689 | 33233.4 |
| 5-oxoprolinase subunit pxpa | CE139_RS08585 | Not Available | Positive | 1864795 - 1865541 | 26357.6 |
| 5-oxoprolinase subunit pxpb | CE139_RS08590 | Not Available | Positive | 1865538 - 1866215 | 24055.9 |
| biotin-dependent carboxyltransferase family protein | CE139_RS08595 | Not Available | Positive | 1866212 - 1867144 | 32790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





