Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS08495 | Not Available | Negative | 1849815 - 1850264 | 16264.6 |
| dhcw motif cupin fold protein | CE139_RS08505 | Not Available | Positive | 1850687 - 1851016 | 11937.1 |
| Trna-leu | Not Available | Not Available | Positive | 1851125 - 1851209 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | CE139_RS08515 | Not Available | Positive | 1851316 - 1852359 | 38164.7 |
| trna guanosine(34) transglycosylase tgt | CE139_RS08520 | Not Available | Positive | 1852370 - 1853488 | 41508.2 |
| preprotein translocase subunit yajc | CE139_RS08525 | Not Available | Positive | 1853636 - 1853980 | 12266.0 |
| protein translocase subunit secd | CE139_RS08530 | Not Available | Positive | 1854045 - 1855913 | 67784.4 |
| protein translocase subunit secf | CE139_RS08535 | Not Available | Positive | 1855924 - 1856829 | 32736.2 |
| glycine zipper 2tm domain-containing protein | CE139_RS08540 | Not Available | Positive | 1856889 - 1857416 | 18344.9 |
| acyltransferase family protein | CE139_RS08545 | Not Available | Negative | 1857568 - 1858608 | 38633.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





