Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate transporter | CE139_RS00485 | Not Available | Positive | 111530 - 112870 | 49224.5 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | CE139_RS00490 | Not Available | Negative | 113018 - 113986 | 34446.1 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | CE139_RS00495 | Not Available | Negative | 113998 - 115464 | 54650.1 |
| transcription termination factor rho | CE139_RS00500 | Not Available | Negative | 115583 - 116845 | 47003.0 |
| thioredoxin trxa | CE139_RS00505 | Not Available | Negative | 117072 - 117398 | 11858.2 |
| fadr/gntr family transcriptional regulator | CE139_RS00510 | Not Available | Negative | 117626 - 118321 | 25154.2 |
| transporter substrate-binding domain-containing protein | CE139_RS00515 | Not Available | Positive | 118589 - 119371 | 27763.6 |
| amino acid abc transporter permease | CE139_RS00520 | Not Available | Positive | 119385 - 120050 | 24532.7 |
| amino acid abc transporter permease | CE139_RS00525 | Not Available | Positive | 120047 - 120697 | 23346.2 |
| amino acid abc transporter atp-binding protein | CE139_RS00530 | Not Available | Positive | 120684 - 121415 | 26762.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





