Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | CE139_RS08445 | Not Available | Positive | 1836868 - 1840767 | 140363.0 |
| ngg1p interacting factor nif3 | CE139_RS08450 | Not Available | Positive | 1840935 - 1841249 | 11497.8 |
| helix-turn-helix domain-containing protein | CE139_RS08455 | Not Available | Negative | 1841253 - 1841549 | 10879.0 |
| valine--trna ligase | CE139_RS08460 | Not Available | Negative | 1841603 - 1844434 | 106569.0 |
| hypothetical protein | CE139_RS08465 | Not Available | Negative | 1844522 - 1844884 | 13435.2 |
| dna polymerase iii subunit chi | CE139_RS08470 | Not Available | Negative | 1844889 - 1845317 | 15979.1 |
| leucyl aminopeptidase | CE139_RS08475 | Not Available | Negative | 1845530 - 1847029 | 52306.0 |
| lps export abc transporter permease lptf | CE139_RS08480 | Not Available | Positive | 1847201 - 1848313 | 40620.4 |
| lps export abc transporter permease lptg | CE139_RS08485 | Not Available | Positive | 1848310 - 1849371 | 38877.8 |
| hypothetical protein | CE139_RS08490 | Not Available | Negative | 1849394 - 1849714 | 11975.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





