Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CE139_RS08395 | Not Available | Negative | 1826175 - 1827119 | 33317.6 |
| arac family transcriptional regulator | CE139_RS08400 | Not Available | Negative | 1827222 - 1827947 | 26159.6 |
| ybay family lipoprotein | CE139_RS08405 | Not Available | Negative | 1828019 - 1828501 | 16696.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | CE139_RS08410 | Not Available | Negative | 1828550 - 1831060 | 94768.4 |
| cold-shock protein | CE139_RS08415 | Not Available | Positive | 1831431 - 1831643 | 7813.05 |
| hypothetical protein | CE139_RS08420 | Not Available | Negative | 1831685 - 1832068 | 14439.0 |
| putative rna methyltransferase | CE139_RS08425 | Not Available | Negative | 1832074 - 1832886 | 30045.2 |
| succinyl-diaminopimelate desuccinylase | CE139_RS08430 | Not Available | Negative | 1832883 - 1834025 | 40779.4 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | CE139_RS08435 | Not Available | Positive | 1834110 - 1834895 | 28125.9 |
| membrane-bound lytic murein transglycosylase mltf | CE139_RS08440 | Not Available | Negative | 1835068 - 1836552 | 55616.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





