Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS08245 | Not Available | Positive | 1789976 - 1790352 | 13767.7 |
| glxa family transcriptional regulator | CE139_RS08250 | Not Available | Positive | 1790453 - 1791388 | 34650.8 |
| hypothetical protein | CE139_RS08255 | Not Available | Positive | 1791544 - 1791699 | 5694.48 |
| dmt family transporter | CE139_RS08260 | Not Available | Negative | 1791773 - 1792678 | 31056.2 |
| lysr family transcriptional regulator | CE139_RS08265 | Not Available | Positive | 1792776 - 1793636 | 30918.4 |
| mfs transporter | CE139_RS08270 | Not Available | Positive | 1793867 - 1795057 | 40250.9 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | CE139_RS08275 | Not Available | Positive | 1795274 - 1796590 | 47978.1 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | CE139_RS08280 | Not Available | Positive | 1796666 - 1797553 | 32678.3 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | CE139_RS08285 | Not Available | Positive | 1797550 - 1798395 | 31330.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | CE139_RS08290 | Not Available | Positive | 1798398 - 1799483 | 39387.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





