Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS08195 | Not Available | Positive | 1777075 - 1777959 | 31180.3 |
| aldehyde dehydrogenase | CE139_RS08200 | Not Available | Negative | 1778531 - 1780021 | 52924.9 |
| dihydrodipicolinate synthase family protein | CE139_RS08205 | Not Available | Negative | 1780024 - 1780926 | 32149.6 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS08210 | Not Available | Negative | 1780977 - 1782293 | 48025.4 |
| glycine betaine/l-proline abc transporter substrate-binding protein prox | CE139_RS08215 | Not Available | Negative | 1782501 - 1783526 | 37000.0 |
| glycine betaine/l-proline abc transporter permease prow | CE139_RS08220 | Not Available | Negative | 1783573 - 1784529 | 34109.4 |
| glycine betaine/l-proline abc transporter atp-binding protein | CE139_RS08225 | Not Available | Negative | 1784581 - 1785615 | 37430.4 |
| lysr substrate-binding domain-containing protein | CE139_RS08230 | Not Available | Positive | 1785958 - 1786923 | 35791.2 |
| mmge/prpd family protein | CE139_RS08235 | Not Available | Positive | 1787033 - 1788376 | 47600.9 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CE139_RS08240 | Not Available | Positive | 1788599 - 1789834 | 46201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





