Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb family transcriptional regulator | CE139_RS08095 | Not Available | Negative | 1752289 - 1753359 | 36791.6 |
| choline bcct transporter bett | CE139_RS08100 | Not Available | Negative | 1753488 - 1755452 | 71903.8 |
| response regulator | CE139_RS08105 | Not Available | Positive | 1755700 - 1756104 | 14813.0 |
| glycoside hydrolase family 15 protein | CE139_RS08110 | Not Available | Negative | 1757046 - 1758875 | 68332.8 |
| sdr family oxidoreductase | CE139_RS08115 | Not Available | Negative | 1758868 - 1759671 | 27968.2 |
| methyl-accepting chemotaxis protein | CE139_RS08120 | Not Available | Negative | 1759756 - 1761402 | 57857.1 |
| mfs transporter | CE139_RS08125 | Not Available | Negative | 1761535 - 1762764 | 43320.8 |
| cytochrome ubiquinol oxidase subunit i | CE139_RS08130 | Not Available | Positive | 1763069 - 1764514 | 53255.1 |
| cytochrome d ubiquinol oxidase subunit ii | CE139_RS08135 | Not Available | Positive | 1764511 - 1765533 | 37641.2 |
| duf2474 domain-containing protein | CE139_RS08140 | Not Available | Positive | 1765533 - 1765694 | 5811.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





