Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavohemoglobin expression-modulating qegla motif protein | CE139_RS08045 | Not Available | Positive | 1742152 - 1743450 | 48436.2 |
| aaa family atpase | CE139_RS08050 | Not Available | Negative | 1743523 - 1745451 | 68079.0 |
| sir2 family nad-dependent protein deacylase | CE139_RS08055 | Not Available | Positive | 1745648 - 1746421 | 27549.1 |
| hypothetical protein | CE139_RS08060 | Not Available | Negative | 1746426 - 1747193 | 28216.8 |
| hypothetical protein | CE139_RS08065 | Not Available | Positive | 1747346 - 1747600 | 8294.56 |
| hypothetical protein | CE139_RS08070 | Not Available | Negative | 1747667 - 1747939 | 10247.3 |
| hdod domain-containing protein | CE139_RS08075 | Not Available | Negative | 1748064 - 1748873 | 29257.0 |
| ggdef domain-containing protein | CE139_RS08080 | Not Available | Positive | 1749217 - 1750236 | 37307.8 |
| diguanylate cyclase | CE139_RS08085 | Not Available | Negative | 1750265 - 1751803 | 56649.9 |
| hypothetical protein | CE139_RS08090 | Not Available | Positive | 1752007 - 1752267 | 9760.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





