Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | CE139_RS07995 | Not Available | Negative | 1731928 - 1734312 | 83102.0 |
| cation transporter | CE139_RS08000 | Not Available | Positive | 1734424 - 1734618 | 6882.25 |
| tetr family transcriptional regulator | CE139_RS08005 | Not Available | Negative | 1734600 - 1735229 | 24131.1 |
| multidrug effflux mfs transporter | CE139_RS08010 | Not Available | Positive | 1735342 - 1736514 | 40719.1 |
| mapeg family protein | CE139_RS08015 | Not Available | Positive | 1736583 - 1736969 | 14262.2 |
| cell division protein zape | CE139_RS08020 | Not Available | Positive | 1737051 - 1738100 | 38891.9 |
| hypothetical protein | CE139_RS08025 | Not Available | Negative | 1738097 - 1738738 | 22741.8 |
| inorganic phosphate transporter | CE139_RS08030 | Not Available | Positive | 1738892 - 1740502 | 56350.4 |
| lysr family transcriptional regulator | CE139_RS08035 | Not Available | Negative | 1740631 - 1741497 | 31363.5 |
| voc family protein | CE139_RS08040 | Not Available | Positive | 1741636 - 1742061 | 16062.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





