Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | CE139_RS00435 | Not Available | Negative | 105654 - 107003 | 49630.4 |
| upf0149 family protein | CE139_RS00440 | Not Available | Negative | 107010 - 107564 | 19183.7 |
| tigr02449 family protein | CE139_RS00445 | Not Available | Positive | 107663 - 107893 | 9126.91 |
| cell division protein zapa | CE139_RS00450 | Not Available | Positive | 107890 - 108198 | 11554.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 108257 - 108434 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | CE139_RS00460 | Not Available | Positive | 108444 - 109079 | 24428.8 |
| hypothetical protein | CE139_RS00465 | Not Available | Negative | 109046 - 109213 | 6505.76 |
| eve domain-containing protein | CE139_RS00470 | Not Available | Positive | 109396 - 109851 | 16636.8 |
| flagellar basal body-associated protein flil | CE139_RS00475 | Not Available | Negative | 109861 - 110268 | 15215.5 |
| duf5924 family protein | CE139_RS00480 | Not Available | Negative | 110314 - 111339 | 38086.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





