Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | CE139_RS07945 | Not Available | Positive | 1723935 - 1724825 | 31158.5 |
| deor/glpr family dna-binding transcription regulator | CE139_RS07950 | Not Available | Positive | 1724882 - 1725661 | 27473.2 |
| mfs transporter | CE139_RS07955 | Not Available | Positive | 1725682 - 1726815 | 37922.7 |
| asma family protein | CE139_RS07960 | Not Available | Positive | 1726883 - 1728931 | 73998.2 |
| hypothetical protein | CE139_RS07965 | Not Available | Positive | 1729061 - 1729297 | 8850.3 |
| ygdi/ygdr family lipoprotein | CE139_RS07970 | Not Available | Positive | 1729294 - 1729515 | 7849.4 |
| rho termination factor n-terminal domain-containing protein | CE139_RS07975 | Not Available | Positive | 1729529 - 1729930 | 14447.7 |
| class i sam-dependent rrna methyltransferase | CE139_RS07980 | Not Available | Negative | 1729985 - 1731178 | 44053.1 |
| hypothetical protein | CE139_RS07985 | Not Available | Negative | 1731246 - 1731485 | 9132.71 |
| cu(i)-responsive transcriptional regulator | CE139_RS07990 | Not Available | Negative | 1731545 - 1731931 | 14134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





