Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 1717263 - 1717378 | Not Available |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | CE139_RS07900 | Not Available | Positive | 1717462 - 1718406 | 34262.2 |
| type iii pantothenate kinase | CE139_RS07905 | Not Available | Positive | 1718396 - 1719148 | 27253.8 |
| hypothetical protein | CE139_RS07910 | Not Available | Positive | 1719145 - 1719324 | 6987.67 |
| duf3301 domain-containing protein | CE139_RS07915 | Not Available | Positive | 1719353 - 1719811 | 17280.0 |
| mfs transporter | CE139_RS07920 | Not Available | Positive | 1719910 - 1721199 | 46312.4 |
| hypothetical protein | CE139_RS07925 | Not Available | Negative | 1721246 - 1721710 | 17361.5 |
| alpha/beta hydrolase | CE139_RS07930 | Not Available | Negative | 1721831 - 1722766 | 34478.2 |
| hypothetical protein | CE139_RS07935 | Not Available | Positive | 1722890 - 1723408 | 19631.1 |
| duf3140 domain-containing protein | CE139_RS07940 | Not Available | Positive | 1723405 - 1723791 | 14538.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





