Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | CE139_RS07695 | Not Available | Positive | 1676357 - 1677529 | 43522.5 |
| lipopolysaccharide kinase inaa family protein | CE139_RS07700 | Not Available | Negative | 1677531 - 1678172 | 24666.7 |
| hypothetical protein | CE139_RS07705 | Not Available | Positive | 1678290 - 1679339 | 40012.6 |
| hypothetical protein | CE139_RS07710 | Not Available | Positive | 1679362 - 1680201 | 30645.2 |
| serine acetyltransferase | CE139_RS07715 | Not Available | Negative | 1680176 - 1680772 | 22033.3 |
| lipid a export permease/atp-binding protein msba | CE139_RS07720 | Not Available | Positive | 1681021 - 1682832 | 66620.2 |
| gnat family n-acetyltransferase | CE139_RS07725 | Not Available | Positive | 1682826 - 1683722 | 33701.2 |
| pig-l deacetylase family protein | CE139_RS07730 | Not Available | Positive | 1683724 - 1685139 | 53495.5 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | CE139_RS07735 | Not Available | Positive | 1685230 - 1686657 | 50642.1 |
| helicase hera-like domain-containing protein | CE139_RS07740 | Not Available | Positive | 1686708 - 1688195 | 52985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





