Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase i | CE139_RS07645 | Not Available | Positive | 1665698 - 1666705 | 36972.1 |
| glycosyltransferase family 4 protein | CE139_RS07650 | Not Available | Positive | 1666702 - 1667820 | 41798.4 |
| lipopolysaccharide core heptose(i) kinase rfap | CE139_RS07655 | Not Available | Positive | 1667817 - 1668623 | 30702.4 |
| lipopolysaccharide kinase inaa family protein | CE139_RS07660 | Not Available | Positive | 1668623 - 1669354 | 28370.2 |
| lipopolysaccharide kinase inaa family protein | CE139_RS07665 | Not Available | Positive | 1669351 - 1670106 | 28970.6 |
| lipopolysaccharide kinase inaa family protein | CE139_RS07670 | Not Available | Positive | 1670103 - 1671524 | 52613.7 |
| carbamoyltransferase | CE139_RS07675 | Not Available | Positive | 1671711 - 1673453 | 64978.9 |
| glycosyltransferase | CE139_RS07680 | Not Available | Positive | 1673450 - 1674583 | 41599.4 |
| glycosyltransferase | CE139_RS07685 | Not Available | Positive | 1674580 - 1675539 | 36150.7 |
| glycosyltransferase family 2 protein | CE139_RS07690 | Not Available | Positive | 1675590 - 1676351 | 29034.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





