Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | CE139_RS07495 | Not Available | Positive | 1625535 - 1626479 | 34502.3 |
| atpase | CE139_RS07500 | Not Available | Positive | 1626653 - 1627507 | 31193.7 |
| ion transporter | CE139_RS07505 | Not Available | Negative | 1627488 - 1628552 | 40477.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CE139_RS07510 | Not Available | Negative | 1628549 - 1629109 | 20281.2 |
| hamp domain-containing sensor histidine kinase | CE139_RS07515 | Not Available | Negative | 1629290 - 1631311 | 75258.1 |
| putative 2-dehydropantoate 2-reductase | CE139_RS07520 | Not Available | Negative | 1631355 - 1632269 | 32982.6 |
| yajq family cyclic di-gmp-binding protein | CE139_RS07525 | Not Available | Positive | 1632394 - 1632873 | 17990.7 |
| mechanosensitive ion channel family protein | CE139_RS07530 | Not Available | Positive | 1632978 - 1633814 | 29398.9 |
| ampg family muropeptide mfs transporter | CE139_RS07535 | Not Available | Negative | 1633822 - 1635537 | 61764.2 |
| mgmt family protein | CE139_RS07540 | Not Available | Negative | 1635566 - 1635904 | 12495.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





