Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1618028 - 1618101 | Not Available |
| m4 family metallopeptidase | CE139_RS07450 | Not Available | Positive | 1618236 - 1619297 | 38227.8 |
| protealysin inhibitor emfourin | CE139_RS07455 | Not Available | Positive | 1619310 - 1619645 | 12687.2 |
| satd family protein | CE139_RS07460 | Not Available | Positive | 1619812 - 1620486 | 25023.0 |
| hypothetical protein | CE139_RS07465 | Not Available | Positive | 1620483 - 1620944 | 16856.9 |
| mbl fold metallo-hydrolase | CE139_RS07470 | Not Available | Negative | 1620947 - 1621978 | 38485.7 |
| pseudouridine synthase | CE139_RS07475 | Not Available | Positive | 1622215 - 1622829 | 22896.7 |
| hypothetical protein | CE139_RS07480 | Not Available | Negative | 1622839 - 1623804 | 35731.0 |
| lyse/argo family amino acid transporter | CE139_RS07485 | Not Available | Negative | 1623867 - 1624466 | 21200.4 |
| lysr family transcriptional regulator argp | CE139_RS07490 | Not Available | Positive | 1624566 - 1625453 | 32131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





