Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | CE139_RS07395 | Not Available | Negative | 1605461 - 1606237 | 28768.8 |
| amino acid abc transporter permease | CE139_RS07400 | Not Available | Negative | 1606234 - 1606896 | 24015.9 |
| amino acid abc transporter permease | CE139_RS07405 | Not Available | Negative | 1606907 - 1607569 | 24258.6 |
| transporter substrate-binding domain-containing protein | CE139_RS07410 | Not Available | Negative | 1607618 - 1608397 | 28458.6 |
| n-acyl-d-amino-acid deacylase family protein | CE139_RS07415 | Not Available | Negative | 1608663 - 1610126 | 51983.0 |
| methyl-accepting chemotaxis protein | CE139_RS07420 | Not Available | Positive | 1610302 - 1612320 | 71826.3 |
| lexa family protein | CE139_RS07425 | Not Available | Positive | 1612417 - 1612848 | 15764.9 |
| y-family dna polymerase | CE139_RS07430 | Not Available | Positive | 1612841 - 1614112 | 46510.8 |
| d-serine/d-alanine/glycine transporter | CE139_RS07435 | Not Available | Negative | 1614128 - 1615510 | 49903.3 |
| atp-binding protein | CE139_RS07440 | Not Available | Positive | 1615867 - 1617933 | 74345.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





