Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic pyranopterin monophosphate synthase moac | CE139_RS07245 | Not Available | Positive | 1579015 - 1579494 | 16969.7 |
| moad/this family protein | CE139_RS07250 | Not Available | Positive | 1579491 - 1579742 | 9237.02 |
| molybdopterin synthase catalytic subunit moae | CE139_RS07255 | Not Available | Positive | 1579745 - 1580200 | 16724.8 |
| atp-dependent rna helicase rhlb | CE139_RS07260 | Not Available | Negative | 1580345 - 1581850 | 55583.6 |
| ggdef domain-containing protein | CE139_RS07265 | Not Available | Negative | 1581946 - 1582896 | 35293.8 |
| alpha/beta hydrolase | CE139_RS07270 | Not Available | Negative | 1583096 - 1583740 | 22823.2 |
| amino acid abc transporter substrate-binding protein | CE139_RS07275 | Not Available | Positive | 1584124 - 1585152 | 36726.8 |
| amino acid abc transporter permease | CE139_RS07280 | Not Available | Positive | 1585253 - 1586440 | 42684.2 |
| amino acid abc transporter permease | CE139_RS07285 | Not Available | Positive | 1586450 - 1587550 | 40111.2 |
| amino acid abc transporter atp-binding protein | CE139_RS07290 | Not Available | Positive | 1587561 - 1588328 | 28918.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





