Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS07195 | Not Available | Positive | 1565465 - 1567603 | 80125.4 |
| phospholipase d-like domain-containing protein | CE139_RS07200 | Not Available | Positive | 1567790 - 1568944 | 44262.1 |
| acyltransferase family protein | CE139_RS07205 | Not Available | Positive | 1569039 - 1570343 | 49483.5 |
| putative quinol monooxygenase | CE139_RS07210 | Not Available | Negative | 1570318 - 1570686 | 13635.2 |
| fumarate hydratase | CE139_RS07215 | Not Available | Negative | 1570814 - 1572334 | 54584.0 |
| 2-hydroxyacid dehydrogenase | CE139_RS07220 | Not Available | Negative | 1572565 - 1573539 | 35051.2 |
| tigr01459 family had-type hydrolase | CE139_RS07225 | Not Available | Negative | 1573566 - 1574429 | 30664.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CE139_RS07230 | Not Available | Negative | 1574547 - 1576007 | 53516.9 |
| peroxide stress protein yaaa | CE139_RS07235 | Not Available | Negative | 1576404 - 1577183 | 29454.0 |
| phoh family protein | CE139_RS07240 | Not Available | Positive | 1577537 - 1578928 | 51595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





