Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase | CE139_RS07145 | Not Available | Positive | 1553988 - 1554977 | 36687.3 |
| dcia family protein | CE139_RS07150 | Not Available | Negative | 1554981 - 1555439 | 17125.1 |
| preprotein translocase subunit seca | CE139_RS07155 | Not Available | Positive | 1555674 - 1558415 | 103777.0 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | CE139_RS07160 | Not Available | Positive | 1558603 - 1559820 | 41953.2 |
| glutathione s-transferase family protein | CE139_RS07165 | Not Available | Positive | 1559903 - 1560541 | 23907.4 |
| nudix family hydrolase | CE139_RS07170 | Not Available | Positive | 1560538 - 1561485 | 34037.7 |
| alkene reductase | CE139_RS07175 | Not Available | Negative | 1561765 - 1562814 | 37781.8 |
| mfs transporter | CE139_RS07180 | Not Available | Negative | 1562830 - 1563993 | 39761.8 |
| arsr/smtb family transcription factor | CE139_RS07185 | Not Available | Negative | 1564010 - 1564300 | 10869.1 |
| duf2857 domain-containing protein | CE139_RS07190 | Not Available | Positive | 1564496 - 1565217 | 24850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





