Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CE139_RS07045 | Not Available | Negative | 1533978 - 1535129 | 40667.8 |
| response regulator transcription factor | CE139_RS07050 | Not Available | Positive | 1535248 - 1535976 | 27240.3 |
| atp-binding protein | CE139_RS07055 | Not Available | Positive | 1535977 - 1537293 | 48832.9 |
| glutaminase b | CE139_RS07060 | Not Available | Positive | 1537370 - 1538284 | 32541.2 |
| hypothetical protein | CE139_RS07065 | Not Available | Negative | 1538470 - 1539354 | 31048.0 |
| cardiolipin synthase | CE139_RS07070 | Not Available | Negative | 1539441 - 1540880 | 53947.8 |
| methyltransferase | CE139_RS07075 | Not Available | Negative | 1540909 - 1542039 | 40466.1 |
| ferredoxin--nadp reductase | CE139_RS07080 | Not Available | Positive | 1542112 - 1542888 | 29499.1 |
| terc family protein | CE139_RS07085 | Not Available | Positive | 1543191 - 1544744 | 57044.1 |
| large-conductance mechanosensitive channel protein mscl | CE139_RS07090 | Not Available | Negative | 1544767 - 1545216 | 16081.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





