Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CE139_RS06995 | Not Available | Positive | 1521335 - 1522252 | 32123.0 |
| acetamidase/formamidase family protein | CE139_RS07000 | Not Available | Negative | 1522218 - 1523150 | 32849.2 |
| apc family permease | CE139_RS07005 | Not Available | Negative | 1523177 - 1524559 | 49594.8 |
| luxr family transcriptional regulator | CE139_RS07010 | Not Available | Positive | 1524712 - 1525476 | 27525.0 |
| duf1348 family protein | CE139_RS07015 | Not Available | Positive | 1525740 - 1526210 | 18255.2 |
| lysr family transcriptional regulator | CE139_RS07020 | Not Available | Positive | 1526283 - 1527188 | 33205.4 |
| caib/baif coa transferase family protein | CE139_RS07025 | Not Available | Positive | 1527298 - 1528488 | 42152.0 |
| hydroxymethylglutaryl-coa lyase | CE139_RS07030 | Not Available | Positive | 1528485 - 1529411 | 32438.1 |
| mfs transporter | CE139_RS07035 | Not Available | Positive | 1529489 - 1530877 | 49293.3 |
| multidrug efflux rnd transporter permease subunit | CE139_RS07040 | Not Available | Negative | 1530880 - 1533978 | 109436.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





