Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | CE139_RS06945 | Not Available | Positive | 1507671 - 1508645 | 34362.8 |
| serine hydroxymethyltransferase | CE139_RS06950 | Not Available | Negative | 1508855 - 1510108 | 45048.5 |
| eal domain-containing protein | CE139_RS06955 | Not Available | Negative | 1510232 - 1514425 | 156698.0 |
| energy-dependent translational throttle protein etta | CE139_RS06960 | Not Available | Positive | 1514637 - 1516301 | 61205.8 |
| molybdopterin-binding protein | CE139_RS06965 | Not Available | Negative | 1516409 - 1516837 | 14334.6 |
| tobe domain-containing protein | CE139_RS06970 | Not Available | Positive | 1516933 - 1517745 | 28355.8 |
| molybdate abc transporter substrate-binding protein | CE139_RS06975 | Not Available | Positive | 1517768 - 1518523 | 26530.6 |
| molybdate abc transporter permease subunit | CE139_RS06980 | Not Available | Positive | 1518528 - 1519205 | 23947.9 |
| molybdenum abc transporter atp-binding protein | CE139_RS06985 | Not Available | Positive | 1519202 - 1520278 | 38708.4 |
| lysr family transcriptional regulator | CE139_RS06990 | Not Available | Negative | 1520270 - 1521196 | 33869.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





