Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cystine transporter | CE139_RS06845 | Not Available | Positive | 1487499 - 1488905 | 48873.0 |
| rep-associated tyrosine transposase | CE139_RS06850 | Not Available | Positive | 1489155 - 1489685 | 20782.7 |
| urease subunit alpha | CE139_RS06855 | Not Available | Negative | 1489812 - 1491512 | 60783.8 |
| urease subunit beta | CE139_RS06860 | Not Available | Negative | 1492119 - 1492424 | 11085.3 |
| gnat family n-acetyltransferase | CE139_RS06865 | Not Available | Negative | 1492421 - 1492930 | 18971.8 |
| urease subunit gamma | CE139_RS06870 | Not Available | Negative | 1492941 - 1493243 | 11002.5 |
| urease accessory protein ured | CE139_RS06875 | Not Available | Negative | 1493323 - 1494162 | 30420.8 |
| arac family transcriptional regulator | CE139_RS06880 | Not Available | Negative | 1495131 - 1496174 | 38236.9 |
| ethanolamine permease | CE139_RS06885 | Not Available | Positive | 1496514 - 1497878 | 47813.7 |
| ethanolamine ammonia-lyase subunit eutb | CE139_RS06890 | Not Available | Positive | 1498045 - 1499436 | 49518.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





