Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oprd family porin | CE139_RS06795 | Not Available | Negative | 1475452 - 1476717 | 46439.3 |
| mfs transporter | CE139_RS06800 | Not Available | Negative | 1476970 - 1478367 | 49806.6 |
| 3-dehydroshikimate dehydratase quic | CE139_RS06805 | Not Available | Positive | 1478814 - 1480715 | 70127.9 |
| tetr/acrr family transcriptional regulator | CE139_RS06810 | Not Available | Positive | 1480770 - 1481426 | 24750.7 |
| glucose 1-dehydrogenase | CE139_RS06815 | Not Available | Negative | 1482148 - 1483005 | 30055.9 |
| sdr family oxidoreductase | CE139_RS06820 | Not Available | Negative | 1483069 - 1483926 | 30149.1 |
| tigr00730 family rossman fold protein | CE139_RS06825 | Not Available | Negative | 1484024 - 1484611 | 20412.9 |
| azurin | CE139_RS06830 | Not Available | Positive | 1484942 - 1485391 | 15797.5 |
| glutathione peroxidase | CE139_RS06835 | Not Available | Negative | 1486318 - 1486866 | 20164.1 |
| hypothetical protein | CE139_RS06840 | Not Available | Negative | 1486948 - 1487277 | 11665.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





