Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CE139_RS06745 | Not Available | Positive | 1464054 - 1464800 | 25710.8 |
| mfs transporter | CE139_RS06750 | Not Available | Positive | 1464939 - 1466363 | 49061.6 |
| oxidoreductase | CE139_RS06755 | Not Available | Positive | 1466395 - 1467225 | 29252.0 |
| duf308 domain-containing protein | CE139_RS06760 | Not Available | Positive | 1467423 - 1468001 | 20409.0 |
| hsp70 family protein | CE139_RS06765 | Not Available | Negative | 1468050 - 1469315 | 46021.9 |
| thiol-disulfide oxidoreductase dcc family protein | CE139_RS06770 | Not Available | Negative | 1469445 - 1469888 | 16884.3 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS06775 | Not Available | Positive | 1470042 - 1470839 | 28232.7 |
| duf502 domain-containing protein | CE139_RS06780 | Not Available | Negative | 1471009 - 1471743 | 26498.1 |
| alpha/beta hydrolase family protein | CE139_RS06785 | Not Available | Negative | 1471830 - 1473647 | 65785.2 |
| pa0069 family radical sam protein | CE139_RS06790 | Not Available | Negative | 1474292 - 1475356 | 40337.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





