Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | CE139_RS06695 | Not Available | Positive | 1452033 - 1452566 | 19813.9 |
| lysr family transcriptional regulator | CE139_RS06700 | Not Available | Negative | 1452571 - 1453500 | 34062.0 |
| fusc family protein | CE139_RS06705 | Not Available | Positive | 1453665 - 1455896 | 80813.1 |
| glucan 1,4-alpha-glucosidase | CE139_RS06710 | Not Available | Positive | 1455998 - 1458430 | 88508.8 |
| acyltransferase family protein | CE139_RS06715 | Not Available | Positive | 1458850 - 1459995 | 42276.3 |
| nad-dependent protein deacetylase | CE139_RS06720 | Not Available | Negative | 1459922 - 1460824 | 32594.0 |
| gyri-like domain-containing protein | CE139_RS06725 | Not Available | Negative | 1460939 - 1461388 | 16245.3 |
| tetr/acrr family transcriptional regulator | CE139_RS06730 | Not Available | Negative | 1461590 - 1462189 | 21638.7 |
| sdr family oxidoreductase | CE139_RS06735 | Not Available | Positive | 1462262 - 1462975 | 24368.3 |
| lysr family transcriptional regulator | CE139_RS06740 | Not Available | Negative | 1463046 - 1463903 | 31201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





