Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS06600 | Not Available | Negative | 1431543 - 1431755 | 7701.52 |
| cdp-diacylglycerol diphosphatase | CE139_RS06605 | Not Available | Negative | 1431778 - 1432614 | 30514.8 |
| dksa/trar family c4-type zinc finger protein | CE139_RS06610 | Not Available | Positive | 1432613 - 1432879 | 9634.05 |
| glutathione s-transferase n-terminal domain-containing protein | CE139_RS06615 | Not Available | Negative | 1432963 - 1433667 | 26355.9 |
| alpha/beta fold hydrolase | CE139_RS06620 | Not Available | Positive | 1433813 - 1434562 | 27140.3 |
| metal-dependent hydrolase | CE139_RS06625 | Not Available | Positive | 1434566 - 1435612 | 39027.2 |
| duf2857 domain-containing protein | CE139_RS25660 | Not Available | Negative | 1435699 - 1435806 | 4295.17 |
| plp-dependent aminotransferase family protein | CE139_RS06630 | Not Available | Positive | 1435975 - 1437420 | 53133.2 |
| sensor domain-containing diguanylate cyclase | CE139_RS06635 | Not Available | Negative | 1437417 - 1439135 | 61993.7 |
| nucleoside 2-deoxyribosyltransferase | CE139_RS06640 | Not Available | Positive | 1439381 - 1439890 | 17904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





