Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | CE139_RS00290 | Not Available | Positive | 63622 - 64671 | 38621.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS00295 | Not Available | Positive | 64658 - 66982 | 86672.7 |
| autotransporter domain-containing sgnh/gdsl hydrolase family protein | CE139_RS00300 | Not Available | Negative | 67035 - 68972 | 68401.8 |
| lysozyme inhibitor lpri family protein | CE139_RS00305 | Not Available | Negative | 70051 - 70440 | 14113.7 |
| translational gtpase typa | CE139_RS00310 | Not Available | Negative | 70586 - 72403 | 67020.4 |
| trna uracil 4-sulfurtransferase thii | CE139_RS00315 | Not Available | Negative | 72561 - 74015 | 54528.3 |
| glutamate--ammonia ligase | CE139_RS00320 | Not Available | Positive | 74401 - 75807 | 51586.1 |
| duf4124 domain-containing protein | CE139_RS00325 | Not Available | Positive | 75968 - 76486 | 17659.8 |
| duf4124 domain-containing protein | CE139_RS00330 | Not Available | Positive | 76486 - 77124 | 23345.3 |
| nitrogen regulation protein nr(ii) | CE139_RS00335 | Not Available | Positive | 77296 - 78360 | 39714.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





